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[–] Disappointed 0 points 3 points (+3|-0) ago 

When you say messed with it what did you use to mess with it?

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[–] thisisntright [S] 0 points 2 points (+2|-0) ago 

I ended up mounting the main hard drive (with the operating system on it) a second time. It didn't mess anything up right away - just when I had to reboot.

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[–] Disappointed 0 points 3 points (+3|-0) ago 

Fair enough, this isn't something I've had to deal with before though and searching it doesn't show up much. Have you tried what @Ghengis_Khan mentioned?

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[–] luckyguy 0 points 2 points (+2|-0) ago  (edited ago)

I wonder if this is a possible bug. Just to clairify because you were a little vauge.

You:

Mounted the / when you booted (automatically obviously).
You mounted it again while you were logged into your computer say to /mnt or any folder really.
Life continued on without interuption for a good while.
You turned off you computer and something was corrupted?

It doesn't seem right to me that that should break a computer.